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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4011693_4012694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4011693 - 4012694

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TTTCTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TTTCTCCCAACA

Flanking Amino Acid:

YGLEPASLLDVFNPNLSMSE

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

62.7

0.32

1.4

63.4

Major PPT

78.7

0.65

0.8

74.5

29.3

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

54.9

0.15

1.9

73.95

37.2

Associated Gene:

Gene:

HSF4

Ensembl Gene ID:

ENSAPLG00000005338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005556

3993939 - 4015138

21200