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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4025108_4025719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4025108 - 4025719

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACGTAC

5'SS Class:

major

3'SS Sequence:

TTTTATTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTGCAACT

Flanking Amino Acid:

KHLNFNKELDDLPRENTVAE

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.44

1.2

62.7

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.8

0.92

0.7

89.2

27.2

Minor 5ss

42.7

-0.8

3.2

55.1

44.8

Minor BPS

61.4

0.44

2.2

87.98

37.6

Associated Gene:

Gene:

DNAAF1

Ensembl Gene ID:

ENSAPLG00000005331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005502

4019730 - 4032830

13101