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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4045862_4047094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4045862 - 4047094

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

AACATCTTATTT

Flanking Amino Acid:

NWTNERTLDDGLGHGTFVAG

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

74.8

31.3

Major BPS

82.6

0.81

0.8

71.7

Major PPT

64.1

0.32

60.7

40.3

Minor 5ss

35.5

-1.6

2.9

44.3

43.6

Minor BPS

50.6

0.1

1.6

63.65

Associated Gene:

Gene:

MBTPS1

Ensembl Gene ID:

ENSAPLG00000005187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005456

4042514 - 4067074

24561