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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4051154_4051736_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4051154 - 4051736

Intron Length:
583

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTAATTTT

5'SS Class:
major

3'SS Sequence:
TCTTTGCTTTTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
QILNSYKPQASLSPSYIDLT

Intron Amino Acid Position:
491

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
82.4
31.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
83
0.74
0.8
81.2
30.9

Minor 5ss
41.8
-0.9
2.9
59
45.4

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
MBTPS1

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4042514 - 4067074
24561