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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4070829_4071651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4070829 - 4071651

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CATGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

CCACCCCAAACT

Flanking Amino Acid:

TGSQSIGPRKKAALVTWGIL

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

35.2

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

69.3

0.44

0.9

61.6

34.7

Minor 5ss

32.6

-2

3.3

40.4

Minor BPS

46.8

-0.1

62.86

46.7

Associated Gene:

Gene:

SLC38A8

Ensembl Gene ID:

ENSAPLG00000005179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005344

4068725 - 4071748

3024