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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4073812_4074306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4073812 - 4074306

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

AALIGRLEDKTLWFDLHQRL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

NECAB2

Ensembl Gene ID:

ENSAPLG00000005133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005336

4072892 - 4085033

12142