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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4075761_4084952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4075761 - 4084952

Intron Length:

9192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGTCTCTCACCA

Flanking Amino Acid:

ILKAMDYTKRVYESGSNVDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

72.7

0.56

30.1

Major PPT

68.6

0.42

0.8

61.8

27.5

Minor 5ss

-2.2

2.9

34.5

Minor BPS

49.9

-0

1.8

65.67

40.5

Associated Gene:

Gene:

NECAB2

Ensembl Gene ID:

ENSAPLG00000005133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005336

4072892 - 4085033

12142