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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4134639_4138808_R


Intron Information:

Intron Rank:
150925

Intron Class:
major

Intron Phase:

Intron Coordinates:
4134639 - 4138808

Intron Length:
4170

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
CATGATCTTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTCCATGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81
0.73
1
79.9
34.9

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
72.8
0.51
1
62.1
43.8

Minor 5ss
34.4
-1.8
2.9
47
41.7

Minor BPS
71.4
0.66
1.5
82.89
30.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4132410 - 4139528
7119