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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4207558_4208280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4207558 - 4208280

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TTTTCTGCTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.2

67.9

36.8

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

76.4

0.59

32.9

Minor 5ss

38.6

-1.3

2.4

43.6

37.9

Minor BPS

46.5

-0.2

2.4

75.66

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579