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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4208447_4210630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4208447 - 4210630

Intron Length:

2184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CTAACCTTAGCT

Flanking Amino Acid:

RLLTSQNATERERKLLLQDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.8

Major BPS

72.3

0.55

73.3

28.9

Major PPT

91.5

0.93

0.6

86.8

Minor 5ss

36.2

-1.6

3.5

52.1

45.1

Minor BPS

64.5

0.53

1.7

77.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120