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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4210785_4210978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4210785 - 4210978

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TCTAGCAAAACC

Flanking Amino Acid:

NGSLHSLIHEHQLYPDLPFP

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

79.4

0.66

0.8

77.9

36.6

Minor 5ss

34.1

-1.8

2.9

42.6

44.2

Minor BPS

44.2

-0.4

2.3

59.84

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120