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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4211421_4213170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4211421 - 4213170

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AGTTAATGAATG

Flanking Amino Acid:

GLPSQEGDIYSFGIMCWESL

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

84.8

0.78

0.9

76.9

42.1

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

46.5

-0.4

1.9

54.33

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120