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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4215358_4216871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4215358 - 4216871

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTACTTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CATTCTTGTACT

Flanking Amino Acid:

NAIYNLMDAKETALNACKGS

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.9

0.67

0.8

37.1

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

55.4

0.25

1.8

73.68

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120