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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4216941_4217598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4216941 - 4217598

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTATCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATAAT

U12 Branch Point Sequence:

TCTTCCCTATCT

Flanking Amino Acid:

TLQTGIRNSEVICPQKNNKE

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

54.9

0.12

1.4

45.4

Major PPT

83.6

0.76

0.8

30.7

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

63.7

0.51

84.68

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120