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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4217765_4218211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4217765 - 4218211

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTTACC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TGCATCTTATTC

Flanking Amino Acid:

NFTPQNTTKKAHPGSDCRKS

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

64.3

Major BPS

82.6

0.81

0.8

71.7

Major PPT

0.99

0.5

88.9

28.2

Minor 5ss

38.6

-1.3

2.4

47.6

40.7

Minor BPS

51.1

0.02

1.6

59.05

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025749

4207456 - 4220034

12579

ENSAPLT00000005241

4206915 - 4220034

13120