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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4239950_4243521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4239950 - 4243521

Intron Length:

3572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TCTTTTCCACCC

Flanking Amino Acid:

ACRLIAAACECLLTFVNCAY

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

0.54

0.7

65.7

30.4

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

44.1

-0.4

58.19

41.2

Associated Gene:

Gene:

SLC7A6

Ensembl Gene ID:

ENSAPLG00000004959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005200

4239377 - 4263747

24371