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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4259132_4260140_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4259132 - 4260140

Intron Length:

1009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATCC

5'SS Class:

weak_major

3'SS Sequence:

CAATTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TGCTTTGCAATT

Flanking Amino Acid:

GLNASILASSRLFFVGSREG

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

62.2

37.5

Major BPS

77.7

0.69

30.2

Major PPT

0.74

0.8

80.7

36.3

Minor 5ss

0.1

2.4

69.3

41.4

Minor BPS

45.4

-0.2

2.1

63.62

41.8

Associated Gene:

Gene:

SLC7A6

Ensembl Gene ID:

ENSAPLG00000004959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005200

4239377 - 4263747

24371