Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_4273949_4275203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4273949 - 4275203

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTGTTATACTC

Flanking Amino Acid:

AGADFCYAIEVFKPMANAAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.6

0.73

0.9

76.6

36.5

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

46.5

-0.2

1.9

61.77

38.7

Associated Gene:

Gene:

PRMT7

Ensembl Gene ID:

ENSAPLG00000004724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005060

4272069 - 4287812

15744