Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_4283730_4284835_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4283730 - 4284835

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCTAT

U12 Branch Point Sequence:

TATATCCTATTT

Flanking Amino Acid:

SLHMMIVEFQDLWRIRSPCG

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

0.25

1.2

58.5

Major PPT

0.97

0.5

16.2

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

48.5

-0

1.9

70.34

40.6

Associated Gene:

Gene:

PRMT7

Ensembl Gene ID:

ENSAPLG00000004724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005060

4272069 - 4287812

15744