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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4312697_4314027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4312697 - 4314027

Intron Length:

1331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGACCC

5'SS Class:

major

3'SS Sequence:

TTTCTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

TTTCTGTTCACA

Flanking Amino Acid:

GPGEDKPWAIGTLLDPEGLY

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.8

40.9

Major BPS

59.9

0.25

1.2

38.9

Major PPT

84.4

0.77

0.8

79.4

32.6

Minor 5ss

33.7

-1.9

3.1

45.2

42.3

Minor BPS

49.1

-0

2.4

72.02

40.3

Associated Gene:

Gene:

SMPD3

Ensembl Gene ID:

ENSAPLG00000004712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004849

4306733 - 4339248

32516