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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4314118_4318474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4314118 - 4318474

Intron Length:

4357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TTTTTCTTGGCC

Flanking Amino Acid:

GDLNFDNCSSEDKLEQQHSL

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

69.6

36.5

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

31.4

-2.1

3.1

36.2

41.7

Minor BPS

49.8

-0

3.5

81.07

33.8

Associated Gene:

Gene:

SMPD3

Ensembl Gene ID:

ENSAPLG00000004712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004849

4306733 - 4339248

32516