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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4480162_4483164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4480162 - 4483164

Intron Length:

3003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTCTTTTTATTT

Flanking Amino Acid:

VAKTLRVLASGDNNRIPVIS

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.8

0.74

87.8

28.8

Minor 5ss

-1.6

3.1

50.1

46.4

Minor BPS

56.7

0.29

1.6

70.13

42.3

Associated Gene:

Gene:

PLA2G15

Ensembl Gene ID:

ENSAPLG00000004674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047985

4479650 - 4495555

15906

ENSAPLT00000037467

4479346 - 4496359

17014

ENSAPLT00000004837

4479650 - 4496359

16710