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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4488698_4496220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4488698 - 4496220

Intron Length:

7523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTATATCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GTCTCCTTATAT

Flanking Amino Acid:

RRPVGPPVVLVPGDLGNQLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

84.3

0.77

0.8

81.7

35.5

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

63.5

0.5

1.8

78.13

43.8

Associated Gene:

Gene:

PLA2G15

Ensembl Gene ID:

ENSAPLG00000004674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041407

4479650 - 4496359

16710

ENSAPLT00000037467

4479346 - 4496359

17014

ENSAPLT00000004837

4479650 - 4496359

16710