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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4620228_4628760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4620228 - 4628760

Intron Length:

8533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

AGTATAAAAACA

Flanking Amino Acid:

MSNSYVENLEVNEIIGRDMS

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

65.3

0.38

71.6

30.1

Major PPT

91.1

0.93

0.6

88.3

21.4

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

41.4

-0.6

53.41

38.1

Associated Gene:

Gene:

NFATC3

Ensembl Gene ID:

ENSAPLG00000004470

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042261

4620103 - 4682869

62767