Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_4782340_4783287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4782340 - 4783287

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTTGGTAAC

5'SS Class:

major

3'SS Sequence:

CTCTTGCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TCTTGTGTGACT

Flanking Amino Acid:

GIGGDYDGVERFPEGLEDVS

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.3

64.8

41.3

Major BPS

0.42

1.1

57.3

41.7

Major PPT

70.9

0.47

0.9

65.7

34.8

Minor 5ss

31.5

-2.1

2.8

38.5

39.6

Minor BPS

48.2

-0

2.4

74.14

43.6

Associated Gene:

Gene:

DPEP2

Ensembl Gene ID:

ENSAPLG00000004307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004431

4778126 - 4784141

6016