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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4818166_4824151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4818166 - 4824151

Intron Length:

5986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

AATGCCTACATA

Flanking Amino Acid:

TDGSKKKVSKSPSMGTLMGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

67.7

0.44

38.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

46.1

-0.3

2.1

58.31

41.9

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478