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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4824299_4824856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4824299 - 4824856

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

CTTGTTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

ATTGCTTCCATT

Flanking Amino Acid:

FLIVLLCCCCTMLTTISMSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

81.5

0.71

0.8

75.8

32.8

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

47.6

-0.1

69.9

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478