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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4824912_4825205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4824912 - 4825205

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TCTTGTTTCATA

Flanking Amino Acid:

SAIATNGVVPAGGSYFMISR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

80.1

0.68

0.8

75.8

32.8

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

49.4

-0

2.1

66.01

41.8

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478