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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4825337_4825754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4825337 - 4825754

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTCTTATTT

Flanking Amino Acid:

YILGAIEILLTYIVPQAAIF

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.83

0.7

85.1

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

68.9

0.67

1.5

82.89

39.2

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478