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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4825997_4827886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4825997 - 4827886

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

ATTTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TGCTTTTTACAT

Flanking Amino Acid:

IKSIFDPPEFPICMLGNRTL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

69.1

43.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

83.5

0.75

0.8

74.4

35.8

Minor 5ss

33.9

-1.8

2.9

41.7

Minor BPS

0.14

1.7

68.86

42.4

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478