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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4828102_4829084_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4828102 - 4829084

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATT

5'SS Class:

strong_major

3'SS Sequence:

GGGATGTTTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TGAACCAAAATA

Flanking Amino Acid:

IPGAASGILKDNLWSNYLEK

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.2

33.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

54.6

0.1

1.2

52.3

46.1

Minor 5ss

44.3

-0.6

3.2

65.5

45.8

Minor BPS

-0.2

1.9

59.01

40.4

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478