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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4829250_4829337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4829250 - 4829337

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

AATTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ACTCCCTTGATC

Flanking Amino Acid:

LVGIFFPSVTGIMAGSNRSG

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

77.2

32.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

81.9

0.72

0.9

78.5

39.1

Minor 5ss

32.1

-2

41.3

44.8

Minor BPS

67.9

0.55

1.2

69.37

36.2

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478