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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4829437_4831291_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4829437 - 4831291

Intron Length:

1855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CTCTGTACTCAAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

ACTTCCTTAGCA

Flanking Amino Acid:

ILAIVTTSLVYFSCVLLFGA

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.8

-0

1.3

55.7

43.9

Major BPS

65.7

0.39

71.3

30.3

Major PPT

63.8

0.31

1.1

60.7

39.4

Minor 5ss

100

1.68

0.4

100

Minor BPS

72.6

0.71

1.5

77.87

38.9

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478