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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4831975_4832500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4831975 - 4832500

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTTTGTACA

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TATCTAATGATA

Flanking Amino Acid:

CGDNIIPFLWVFGHGKANGE

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

65.4

40.1

Major BPS

85.7

0.89

0.8

22.2

Major PPT

90.4

0.91

0.7

28.1

Minor 5ss

-1.4

2.3

36.6

Minor BPS

45.3

-0.3

1.8

58.53

34.1

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478