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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4832620_4833065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4832620 - 4833065

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGAAC

5'SS Class:

major

3'SS Sequence:

TTTGTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

GTATGCTAAAAA

Flanking Amino Acid:

SLDMVAPILSMFFLMCYLFV

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

75.1

34.7

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

86.8

0.83

0.7

81.7

30.4

Minor 5ss

-1.7

3.3

47.5

41.6

Minor BPS

-0.1

2.1

62.34

43.4

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478