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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4833165_4833521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4833165 - 4833521

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TACTCACTAATA

Flanking Amino Acid:

NWRPRFKYYHWALSFLGMSI

Intron Amino Acid Position:

511

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

52.5

0.07

1.9

66.65

39.6

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478