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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4835141_4836069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4835141 - 4836069

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTCATT

5'SS Class:

major

3'SS Sequence:

TTATTTTATCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTATCC

Flanking Amino Acid:

EEGPPHTKNWRPQLLVLLKL

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

74.8

41.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.9

77.8

40.4

Minor 5ss

44.3

-0.6

3.2

66.6

44.3

Minor BPS

62.7

0.38

1.6

74.3

36.6

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478