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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4836239_4837364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4836239 - 4837364

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

TTTTCCTTGTCT

Flanking Amino Acid:

TYGEAQAAEQTIKNMMDIEK

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

78.6

0.64

0.9

69.2

41.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

59.2

0.37

3.5

95.37

31.5

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478