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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4837561_4838556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4837561 - 4838556

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CCCCATCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

TCAGAGTTAACT

Flanking Amino Acid:

EDPRSWKTFIGTVRCTTAAH

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

65.2

0.34

60.4

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

48.4

-0

2.3

69.44

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478