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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4838727_4838940_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4838727 - 4838940

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

TCCCTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTTCTGAGAATT

Flanking Amino Acid:

LLPFLLKQHKVWRKCKMRIF

Intron Amino Acid Position:

765

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.6

39.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

81.1

0.7

72.9

Minor 5ss

34.3

-1.8

3.2

43.3

38.2

Minor BPS

42.1

-0.5

2.2

63.82

40.4

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020712

4815785 - 4839215

23431

ENSAPLT00000004336

4818085 - 4844562

26478