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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4840277_4842981_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4840277 - 4842981

Intron Length:

2705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

GCTTTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GTGTTTCTAACA

Flanking Amino Acid:

GSFRDLISIKPNQSNVRRMH

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

69.1

43.2

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.5

0.64

0.8

73.1

31.8

Minor 5ss

36.6

-1.5

3.2

54.8

42.5

Minor BPS

0.25

1.7

68.12

38.4

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004336

4818085 - 4844562

26478