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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4843116_4844470_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4843116 - 4844470

Intron Length:

1355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TTTACTGAAACAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTGTCCTTGACT

Flanking Amino Acid:

PPKNTDGDENYMEFLEVLTE

Intron Amino Acid Position:

951

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.8

-0

1.3

55.7

43.9

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

0.38

1.1

62.7

42.2

Minor 5ss

100

1.68

0.4

100

Minor BPS

87.4

1.26

0.9

95.37

31.5

Associated Gene:

Gene:

SLC12A4

Ensembl Gene ID:

ENSAPLG00000004021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004336

4818085 - 4844562

26478