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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4902802_4905351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4902802 - 4905351

Intron Length:

2550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGGTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TACGTCTGACTT

Flanking Amino Acid:

FMNVRGTFKERLAYCITPEN

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

69.9

0.45

0.9

68.7

37.2

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

46.3

-0.2

1.8

60.85

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455