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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4905520_4909013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4905520 - 4909013

Intron Length:

3494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

TGTCTCAAAACA

Flanking Amino Acid:

WKFVSPAFLLFVVIVSIINF

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

79.3

0.66

0.7

73.3

31.6

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

49.2

-0

1.9

66.35

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455