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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4909115_4915535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4909115 - 4915535

Intron Length:

6421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ACATCCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

ATGTCCACATCC

Flanking Amino Acid:

MEAIGVSWFYGVDRFSEDIQ

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

68.7

0.42

0.9

59.2

37.4

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

47.1

-0.2

62.32

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455