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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4915636_4917779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4915636 - 4917779

Intron Length:

2144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCATGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

CATCTCTCAACT

Flanking Amino Acid:

FLLALFCITNGGIYVLTLLD

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

61.1

0.25

0.9

54.5

35.1

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

61.2

0.43

1.6

74.76

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455