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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4917909_4921193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4917909 - 4921193

Intron Length:

3285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TTCCCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

TTAACGAGAACT

Flanking Amino Acid:

MLLTLGIDSSMGGMEAVITG

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

81.7

0.71

0.7

80.3

Minor 5ss

34.9

-1.7

2.9

52.3

44.3

Minor BPS

45.7

-0.2

2.4

72.09

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455