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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4921307_4922030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4921307 - 4922030

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATTACTTCTACT

Flanking Amino Acid:

KVKIEDVATEGAGLVFILYP

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

73.8

0.59

1.3

72.8

Major PPT

86.9

0.83

0.7

86.2

26.5

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

52.6

0.16

1.9

75.55

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455