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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4922156_4923883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4922156 - 4923883

Intron Length:

1728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCATCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTTGTTTTAACC

Flanking Amino Acid:

SYNKFDNNCYRDALLTSTIN

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

70.5

0.46

0.9

64.3

36.8

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

68.2

0.55

1.4

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455