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Intron Name: Anas_platyrhynchos_platyrhynchos_12_4929006_4941083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4929006 - 4941083

Intron Length:

12078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATCTGGTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTCTGTGTATCT

Flanking Amino Acid:

YKLTPAAEFYERGVLHLHES

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

64.8

0.33

58.7

41.6

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

44.9

-0.3

2.5

70.73

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003879

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004101

4901070 - 4965524

64455